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Vijai Joseph's Newsletter Archive

Sat, Dec 7 2019

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Hello and welcome to my Nuzzel newsletter! Vijai Joseph (Geneticist @MSKCC, NEW YORK. Interested in Cancer Genomics, Bioinformatics, GWAS, gene regulation, variant annotations and nextgen-sequencing.)
BCFtools/HTSlib - Downloads
Samtools

SAMtools and BCFtools are distributed as individual packages. The code uses HTSlib internally, but these source packages contain their own copies of htslib so they can be built independently. HTSlib is also distributed as a separate package which…

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When a DNA Test Says You're a Younger Man, Who Lives 5,000 Miles Away
The New York Times – Heather Murphy – Dec 7, 2:00 AM

Three months after his bone marrow transplant, Chris Long of Reno, Nev., learned that the DNA in his blood had changed. It had all been replaced by the DNA of his donor, a German man he had exchanged just a handful of messages with. He'd been…

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Population genetics of the coral Acropora millepora: Towards a genomic predictor of bleaching
bioRxiv.org

New Results View ORCID Profile Zachary L Fuller, Veronique J.L. Mocellin, View ORCID Profile Luke Morris, View ORCID Profile Neal Cantin, Jihanne Shepherd, Luke Sarre, Julie Peng, Yi Liao, Joseph Pickrell, View ORCID Profile Peter L Andolfatto…

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Prokaryotic Single-Cell RNA Sequencing by In Situ Combinatorial Indexing
bioRxiv.org

New Results Sydney B Blattman, Wenyan Jiang, Panos Oikonomou, View ORCID Profile Saeed Tavazoie doi: https://doi.org/10.1101/866244 Despite longstanding appreciation of gene expression heterogeneity in isogenic bacterial populations, affordable and…

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Can Biology Class Reduce Racism?
The New York Times – Amy Harmon – Dec 7, 2:00 AM

Please sign up here to have the Race/Related newsletter delivered weekly to your inbox. COLORADO SPRINGS — Biology textbooks used in American high schools do not go near the sensitive question of whether genetics can explain why…

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